Tag
Seed Adding
The algorithm used to add a seed to a SeedSet.
Functions
addSeedAdds a seed to an existing set.
addSeedsAdds several seeds to an existing set. If a merging or chaining algorithm is used seeds are added if the merging or chaining fails.
Tags
Merge
Merging of Seeds.
Single
Simple adding of a seed to the set. No chaining or merging.
Blat
Chaining of seeds. Gap is filled with smaller matching segments.
Chaos
Chaining of seeds. One gap is introduced at the best position.
SimpleChain
Chaining of seeds.
See Also
addSeed, addSeeds
SeqAn - Sequence Analysis Library - www.seqan.de